Archive for the 'science sources' Category

Alaska bluets not dragons or flowers but damsels

Steve over at whatdoino grabbed a great photo

of the ladybugs I mentioned earlier

Along with the ladybug, he posted a photo of what most of us would call a dragonfly or maybe a darningneedle or damselfly.

    It is a bluet, but not the flower.

    I found this out because in July 2005 I photographed a midnight visitor in Bethel.
    Alaska bluet, midnight visitor
    This stunner looks like it is made of turquoise and jet by a Pueblo artist.

    Of course, I had to find out what kind of dragonfly it was or whether it was a darningneedle (and was there a difference between darning needles, damselflies, and dragonflies?). Turns out to be a bluet. I think it is a taiga bluet.

    I had no idea that Alaska had that many related insects. Nor that our state insect isn’t the mosquito but the 4-spotted skimmer, a dragonfly.

    • Dragonflies of Alaska by John Hudson and Robert H. Armstrong is the local reference, Todd Communications, 203 W. 15th Ave. Suite 102, Anchorage, AK 99510, for $12.95. ISBN:1-57833-302-4 available at TitleWave
    • Digital Dragonflies with photos by family. This site is related to the book, A Dazzle of Dragonflies which one really needs in a natural history library. They also explain how to get those dazzling photos (flatbed scanner).
      by Forrest L. Mitchell and James L. Lasswell
      # Hardcover: 224 pages
      # Publisher: Texas A&M University Press (April 30, 2005)
      # Language: English
      # ISBN-10: 1585444596
      # ISBN-13: 978-1585444595
      # Product Dimensions: 11.2 x 8.8 x 0.8 inches
      http://www.dragonflies.org/catalog.htm

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    New scientific summary of flu transmission and protection

    Influenza and Personal Protective Respiratory Equipment

    The Council of Canadian Academies was asked by the Government of Canada to undertake an assessment on the modes of transmission of influenza and the contribution of respirators or surgical masks towards inhibiting the spread of the virus.

    Question: How and where is influenza (both seasonal and pandemic) transmitted? Based on the conclusions of this review, what is the contribution that N95 respirators or surgical masks will make in the prevention of transmission of influenza?

    in pdf file format
    The Complete Report (0.98 mb)
    Report in Focus (235 kb)
    News Release (102 kb)


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    Castor oil soap and Dettol Lysol

    My apologies for not returning sooner to Mr. M. Manogaran’s interesting query left as a comment at
    http://ykalaska.wordpress.com/2006/05/03/disinfectants-for-camp-field-and-household/ (Scrounging for funds interferes with interesting work.)


    Kindly write to the %age proportion of Castor Oil Soap-35% being used to formulate Antiseptic Liquid Like Dettol.

    I think the interest is in
    * why is there soap in a disinfectant and
    * why is the soap made from castor oil?

    If I have failed to ask and/or answer your questions correctly please let me know. If anyone can provide additional references or a better discussion, please note in the comments.

    Unfortunately, I am not an organic chemist so I can’t give great detail. But here is what I think is the short answer. The soap is used to keep the germicide (cresol or phenol) in solution until it is mixed with water for actual use (the cloudy mixed result indicates the phenol compound becoming suspended rather than dissolved). Soap is made from a fat or oil and an alkali. Castor oil has particular physical properties which make it a good molecule for making the soap to interact with the cresol/phenol molecule.

    The liquid concentrate of Dettol ® and brown-bottle Lysol ® are composed of a phenol or cresol compound, alcohols, pine oil (Dettol®) and “other ingredients” which are soap, water, and caramel for coloring. When first introduced to Britain, the formula for Lysol was 50% cresol and the rest liquid soap. Lysol was so important that its commercial formula was legally established in the British Pharmacopoeia and in 1934 court standards “held that Lysol must contain 47 to 53 per cent. of cresols”. ["To use this [fake] article as a disinfectant might be worse than using none at all; its use would give a false feeling of security.”
    http://www.rsc.org/delivery/_ArticleLinking/DisplayArticleForFree.cfm?doi=AN9345900691 (pdf file)]

    I have added below some references for further examination but in particular the chemical references or databases used for the lay term lysol, Lysol ® and Dettol ®. I have tried at the end to give the identification numbers for the compounds under discussion. These ID numbers, for example the CAS number, are unique to a chemical compound. The use is similar to the binomial scientific name used to specify which of the very many different plants in different cultures that have the same common name.

    CAS REGISTRY and CAS Registry Numbers. The CAS REGISTRY is the largest and most current database of chemical substances [...] http://www.cas.org/expertise/cascontent/registry/regsys.html

    These databases can also be searched for the chemical or toxic properties of other chemicals. The Chemical Abstract Service (CAS) the 100-year old database of the American Chemical Society, is an excellent resource but only available for a fee. There is a comparable US Pharmacopoeia (USP) and a British Pharmacopoeia (BP) but perhaps someone else can locate the Internet links to these databases.

    =================================== Continue reading ‘Castor oil soap and Dettol Lysol’

    CDC guideline for hand hygiene in health-care settings

    I’m not sure how I missed this reference. It appeared in the Morbidity Mortality Weekly Report Recommendations and Reports, October 25, 2002 / 51(RR16);1-44 They provide a glossary, an interesting historical summary, a precís of skin, evaluation of behavioral changes, and more.

    Recommendations of the Healthcare Infection Control Practices Advisory Committee and the HICPAC / SHEA / APIC / IDSA Hand Hygiene Task Force, Prepared by John M. Boyce, M.D., Didier Pittet, M.D.

    The Guideline for Hand Hygiene in Health-Care Settings provides health-care workers (HCWs) with a review of data regarding handwashing and hand antisepsis in health-care settings. In addition, it provides specific recommendations to promote improved hand-hygiene practices and reduce transmission of pathogenic microorganisms to patients and personnel in health-care settings. This report reviews studies published since the 1985 CDC guideline (Garner JS, Favero MS. CDC guideline for handwashing and hospital environmental control, 1985. Infect Control 1986;7:231–43) and the 1995 APIC guideline (Larson EL, APIC Guidelines Committee. APIC guideline for handwashing and hand antisepsis in health care settings. Am J Infect Control 1995;23:251–69) were issued and provides an in-depth review of hand-hygiene practices of HCWs, levels of adherence of personnel to recommended handwashing practices, and factors adversely affecting adherence. New studies of the in vivo efficacy of alcohol-based hand rubs and the low incidence of dermatitis associated with their use are reviewed. Recent studies demonstrating the value of multidisciplinary hand-hygiene promotion programs and the potential role of alcohol-based hand rubs in improving hand-hygiene practices are summarized. Recommendations concerning related issues (e.g., the use of surgical hand antiseptics, hand lotions or creams, and wearing of artificial fingernails) are also included.

    Part I. Review of the Scientific Data Regarding Hand Hygiene
    Historical Perspective
    Normal Bacterial Skin Flora
    Physiology of Normal Skin
    Definition of Terms
    Evidence of Transmission of Pathogens on Hands
    Models of Hand Transmission
    Relation of Hand Hygiene and Acquisition of Health-Care–Associated Pathogens
    Methods Used To Evaluate the Efficacy of Hand-Hygiene Products
    Review of Preparations Used for Hand Hygiene
    Irritant Contact Dermatitis Resulting from Hand-Hygiene Measures
    Factors To Consider When Selecting Hand-Hygiene Products
    Hand-Hygiene Practices Among HCWs [health care workers]
    Adherence factors
    Lessons Learned from Behavioral Theories
    Methods Used To Promote Improved Hand Hygiene
    Other Policies Related to Hand Hygiene (fingernails, gloves, jewelery)
    Web-Based Hand-Hygiene Resources
    Part II. Recommendations
    Part III. Performance Indicators
    References

    see also
    Hands washing, sanitizers
    Song to time hand washing for hygiene and disease prevention
    Clean Hands Week: How will you celebrate?
    Give germs the boot, not our babies: unwashed hands make everyone sick


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    New online resource for a snapshot of tuberculosis (TB) today

    from SciDev Net (see sidebar)

    Dear colleague,

    Visit SciDev.Net’s new online resource for a snapshot of tuberculosis (TB) today — who it affects, where it might spread in the future and how it can be treated and controlled:

    www.scidev.net/tuberculosis

    TB has always taken its toll on poor nations, but the way the epidemic is evolving — the growing link between TB and HIV that threatens to overwhelm sub-Saharan Africa, and the drug-resistant strains that are making treatment harder — means that understanding the changing face of the disease is more important than ever.

    The collection includes:

    * An introduction to TB and our online resource
    www.scidev.net/tb/intro

    * Facts & figures on the prevalence of TB in the developing world www.scidev.net/tb/facts

    * Opinions ­ key stakeholder views on collaboration, treatment and diagnostics www.scidev.net/tb/opinion

    * A feature examining the threat of bovine TB to human health www.scidev.net/tb/feature

    * Articles ­ all SciDev.Net’s latest TB coverage
    www.scidev.net/tb/articles

    * Policy ­ summaries of relevant policy briefs
    www.scidev.net/tb/policy

    * Key documents ­ short summaries of significant publications www.scidev.net/tb/key_docs

    * Links to key organisations relevant to TB treatment and control
    www.scidev.net/tb/links

    * Definitions ­ a directory of terms used in TB research, treatment and control www.scidev.net/tb/definitions

    Add this to Bookmarks:

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    Cancer vaccine now available

    speaking of My 3 things everyone should know to prevent bird flu

    The Section of Epidemiology Bulletin, State of Alaska released today announces the good news that the vaccine against the virus causing some cancers, disfigurement, and childlessness will be available from the Vaccines for Children Program.

    VFC Eligibility Criteria
    Vaccines for Children (VFC) is a federal entitlement program that pays for vaccines for children aged 18 years or younger who meet at least one of the following eligibility criteria:
    • Medicaid eligible;
    • Alaska Native or American Indian;
    • Uninsured;
    • Underinsured, i.e., has insurance but it does not cover the cost of vaccines, and receiving services at a Federally Qualified Health Center (FQHC).

    The bad news is that only girls are mentioned as recipients even though boys are also eligible for the vaccine program.

    It is very important that boys and girls both get the vaccine. Men and boys do suffer maiming and illness from this virus. Aren’t they also worthy of protection?

    As the NHS Blog Doctor

    points out, “… if you want to protect your teenage daughters against this, or this and your teenage sons against this, I would get them the immunisation as soon as it becomes available.” [The links are to medical teaching sites and pathology images.]

    The vaccine is to protect all children, not just some. Contact your legislators or E-mail the Governor to be sure your grandsons and sons are also protected, starting June 2007.

    2007-04-10 The manager of the Alaska Immunization Program, Laurel Wood, has kindly informed me that boys cannot be included for vaccination because the US Federal Drug Administration has not licensed it for boys and young men in the United States.

    Currently the FDA has approved Gardasil for use only in females. (See question #11 at the FDA website: http://www.fda.gov/cber/products/hpvmer060806qa.htm)
    This is based on the data currently available to support the safety and efficacy of the vaccine. Additional testing is being conducted to establish this information for males. If this vaccine receives FDA licensure for use in boys, we will begin to provide it through the same Vaccines for Children Program discussed in the Epidemiology Bulletin.

    However, in 2006, the 25 countries of the European Union, including the five largest which are France, Germany, Italy, Spain and the United Kingdom, have approved the vaccine as safe and effective for boys, as well.

    In New Zealand, http://www.moh.govt.nz/moh.nsf/pagesmh/4993?Open

    # Gardasil is indicated in females aged 9 to 26 years for the prevention of cervical, vulva and vaginal cancer, precancerous or dysplastic lesions, genital warts and infection caused by Human Papillomavirus (HPV) types 6, 11, 16 and 18 (which are included in the vaccine.)

    # Gardasil is indicated in males 9 to 15 years for the prevention of infection caused by Human Papillomavirus (HPV) types 6, 11, 16 and 18.

    Maybe Sen. Murkowski and Sen. Stevens should be contacted.

    Add this to Bookmarks:

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    find nifty other Bethel maps

    Bering Sea bloom, Kuskokwim silt

    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
    • “The figure above depicts how much air temperatures near the Earth’s surface changed relative to the global mean temperature from 1951 to 1980. NASA researchers used maps of urban areas derived from city lights data to account for the “heat island” effect of cities.” [I'll locate the nighttime image. Bethel is a heat island and a spot just north on the coast is also very bright.]
      http://earthobservatory.nasa.gov/Newsroom/NewImages/images.php3?img_id=5210
    • “Continued Sea Ice Decline in 2005″ This graph shows the five-day mean sea ice extent for July through September for the years 2002 through 2005. All four years were below the average sea ice extent for 1979-2000 (gray line). In fact, recent sea ice extent falls below the 1979-2000 average by an area twice the size of Texas.
      http://earthobservatory.nasa.gov/Newsroom/NewImages/images.php3?img_id=17047
    • “Black Carbon in Smoke over Alaska ” third week of August 2005, moke contains many substances, including carbon dioxide, carbon monoxide, water vapor, and particulate matter. OMI measures smoke by tracking black carbon particles, or soot, that absorb ultraviolet (UV) radiation, the wavelengths of sunlight that cause sunburns. Smoke was from Interior Alaska fires.
      http://earthobservatory.nasa.gov/Newsroom/NewImages/images.php3?img_id=17012

    Add this to Bookmarks:

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    World TB Day 2007 March 24

    As I mentioned last year | World TB Day — March 24, 2006 |

    Many people in our area remember the TB impacts and prevention of their childhood. Some of the lessons learned then will be useful in preparing for any new pandemic. Unfortunately, younger people do not know that history; others have forgotten it. Remember the caution not to spit? Now that it is still sub-zero temperatures, check out the funny-looking little cones of ice in the AC store parking lot.

    Incidence of TB Alaska is high

    see also previous | Study Explores Social Effects of TB in Southwest Alaska |

    World TB Day is observed on March 24 each year and commemorates the date in 1882 when Dr. Robert Koch announced the discovery of Mycobacterium tuberculosis, the bacterium that causes tuberculosis (TB). Worldwide, TB remains one of the leading causes of death from infectious disease. An estimated 2 billion persons (i.e., one third of the world’s population) are infected with M. tuberculosis. Each year, approximately 9 million persons become ill from TB; of these, nearly 2 million die from the disease. World TB Day provides an opportunity for TB programs, nongovernmental organizations, and other partners to describe problems and solutions related to the TB pandemic and to support worldwide TB-control activities. The theme for this year’s observance is “TB Elimination: Now is the Time!”

    After approximately 30 years of decline, the number of TB cases reported in the United States increased 20% during 1985–1992. This led to a renewed emphasis on TB control and prevention during the 1990s. However, although the 2006 TB rate is the lowest recorded in the United States since national reporting began in 1953, the average annual decline has slowed since 2000. In addition, multidrug-resistant TB remains a threat, extensively drug-resistant TB has become an emerging threat, and persons of racial/ethnic minority populations and foreign-born persons continue to account for a disproportionate number of TB cases.

    CDC and its partners are committed to eliminating TB in the United States. In many states, education and awareness programs convened by local TB coalitions will take place in commemoration of World TB Day. Additional information about World TB Day and CDC TB-elimination activities is available at

    More information is available from SciDevNet
    Tuberculosis (TB) kills over one million people each year. Control is proving difficult in the face of drug-resistant strains and the increasing threat of coinfection with HIV/AIDS.

    SciDev.Net brings you a collection of news, views and information on this curable disease to mark World TB Day tomorrow and highlight some of the issues facing TB control in the developing world:


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    Results Birds and Influenza from Asia into Alaska

    Winker K, McCracken KG, Gibson DD, Pruett CL, Meier R, Huettmann F, et al. Movements of birds and avian influenza from Asia into Alaska. Emerg Infect Dis [serial on the Internet]. 2007 Apr [date cited]. Available from

    Abstract
    Asian-origin avian influenza (AI) viruses are spread in part by migratory birds. In Alaska, diverse avian hosts from Asia and the Americas overlap in a region of intercontinental avifaunal mixing. This region is hypothesized to be a zone of Asia-to-America virus transfer because birds there can mingle in waters contaminated by wild-bird–origin AI viruses. Our 7 years of AI virus surveillance among waterfowl and shorebirds in this region (1998–2004; 8,254 samples) showed remarkably low infection rates (0.06%). Our findings suggest an Arctic effect on viral ecology, caused perhaps by low ecosystem productivity and low host densities relative to available water. Combined with a synthesis of avian diversity and abundance, intercontinental host movements, and genetic analyses, our results suggest that the risk and probably the frequency of intercontinental virus transfer in this region are relatively low.

    The article has a good synopsis of why anyone would be interested in Alaska for the study of pandemic avian influenza (of any type). The data also add to the work on whether wild birds or domestic birds would have a greater influence on bird to human exposures to the H5N1 avian flu. The article is also an easily accessed scientific paper to study for its structure of presenting information and interpretations of data (but the data themselves are not included). I wish the studies had included stable nuclide analyses for examining natural variation in environmental chemistry (and in tracing the species and human food webs), but no one asked ;0)
    See previous

    We found low rates of infection among the 8,254 samples obtained from the most important host groups, waterfowl (Anatidae) and shorebirds (Charadriidae and Scolopacidae; Appendix Table). From these samples we obtained only 5 isolates, which represent an infection rate of just 0.061%. These isolates included hemagglutinin subtypes H3, H4, and H6. The 5 isolates were found in 3 (0.2%) of 1,477 green-winged teal (Anas crecca), 1 (0.76%) of 131 mallards (Anas platyrhynchos), and 1 (0.03%) of 3,703 northern pintails (Anas acuta). We found neither evidence of a clearly Eurasian origin for any of the virus genes sequenced from these Alaska isolates nor H5 subtypes. Our data do show a remarkably close genetic association between avian influenza (H6) virus in Alaska ducks and a poultry outbreak in California in nucleoprotein and nonstructural protein A genes. This finding reflects real-time connections of migratory ducks between Alaska and California, and this vector connection extends into the Russian Far East These findings affirm the intracontinental importance and risk posed by this region…

    The infection rates we found are substantially lower than those found for interior Alaska… Aerial surveys of waterfowl across Alaska show more ponds and fewer ducks per unit area on tundra; the number of ducks per pond on tundra habitat is less than half the number found in the boreal-forest dominated interior. This … resulting in the dilution of virus in waters with fewer available hosts, may in part explain our results. This is the first geographically and taxonomically extensive Arctic AI surveillance in North America, and it suggests that some Arctic effect lowers infection rates, thus lowering the risk of intercontinental viral transfer in these high-latitude regions…

    [while the current Arctic and sub-Arctic regions may result in a lower population density of birds and their shed viruses (and also people) it is the lower density and not the "Arctic" per se which affects the infection rate of the virus. However, the lower density may be only of the birds. Other research [cited here, | flu viruses survive tundra ponds | and here, | Frozen fecal bird flu types |] has shown that the viruses may survive in ponds between breeding seasons (over winter) and thus might accumulate or become more concentrated in numbers. As we know from disease ecology and biocultural anthropology, the disease process involves several factors besides presence and abundance of the infective microorganism. mpb]

    Human population densities in Alaska are relatively low, especially in the Beringian Crucible, and Alaska lacks a large agricultural sector. However, mammalian carnivores abound and could be susceptible hosts. Direct human infection from wild birds is possible, but transmission from birds to humans is difficult. Nevertheless, exposure in this region may be considerable; hunters kill ≈99,000 waterbirds for food each year on the Yukon-Kuskokwim Delta alone.

    I knew the testing for bird flu was earlier than last March when the program was publicized, but hadn’t known it was 9 years old.

    …We obtained our baseline data on viruses and vectors by screening wild birds for AI virus in western Alaska, starting in 1998. We focused on western Alaska because of the unparalleled overlap of Old World and New World bird migration systems in this region. To estimate the risk of Asian-origin AI viruses being delivered by migratory birds to North America through Alaska, we evaluated AI virus infection rates, bird movements, and the diversity and degree of intercontinental host overlap…

    There is a table with “Species of waterfowl (Anatidae) and shorebirds (Charadriidae, Recurvirostridae, and Scolopacidae) in Alaska with an Old World connection or from which cloacal swabs or fecal samples were obtained, Alaska, 1998–2004″ but once again, there are no results of these samples and no identification of where the samples came. I’ll list the bird names in a comment when I can get them.

    Asian Alaska bird ranges


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    help SciDev.Net reach its registration target

    I think everyone should register to support SciDevNet. (If you mention my name, and I win a subscription to New Scientist, then I can apply that knowledge back to here.)

    DEADLINE

    Subject: Please help SciDev.Net reach its registration target for 2006

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    At the beginning of this year, we promised our donors that we would try to increase the number of people who have registered with SciDev.Net by 40 per cent — from 20,000 to 28,000.

    As of this morning (29 December), the figure stands at 27,765, which means that we are still 235 short of our target, with three days to go.

    We can still make our target, but we need your help to do so.

    You can help by persuading one — or preferably more — of your friends and/or colleagues to register with us. In doing so, they will be eligible to receive our free weekly email alert, listing all new items added to the SciDev.Net website over the previous seven days.

    They can register either by following the link in the top right-hand corner of our homepage (http://www.scidev.net), or by going directly to http://www.scidev.net/register

    As an incentive, we will enter both your name and that of the new registrant(s) into our anniversary draw, the first prize of which is an annual subscription to New Scientist magazine (for further details, see here: http://www.scidev.net/anniversary2006).

    There are also a number of runners-up prizes. But even if you are not among the winners, helping us to achieve our annual target for new registrants is a small (and cost-free) way of demonstrating your support for our activities.

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